HDF5 Files in NeuroExplorer

NeuroExplorer can read a number of proprietary and open source file formats:

nex import1

Several open source projects (KlustaSuite, Neo, NIX, LBNL Brain, Orca, Neurodata Without Borders) utilize open source Hierarchical Data Format (HDF5) to store neurophysiological data. NeuroExplorer 5.023 (released on December 16, 2015) can import KlustaSuite .kwik files with data stored in HDF5 format.

If you are using any other HDF5-based file format and would like to import this file format directly in NeuroExplorer, send an e-mail to [email protected] With all the basic code to read data from HDF5 files in place, I can add import of another HDF5 file format to NeuroExplorer in a few days.